FastQCFastQC Report
Tue 26 Jul 2022
EGAF00005112510

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005112510
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1713146
Sequences flagged as poor quality0
Sequence length101
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG117230.6842966098627904No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT27200.1587722237334121No Hit
GTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGCCGCGGTAC17390.10150915333544251No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)