FastQCFastQC Report
Thu 28 Jul 2022
EGAF00005112900

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005112900
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2308885
Sequences flagged as poor quality0
Sequence length101
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG121610.5267044482509956No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT26110.11308488729408352No Hit
GTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGCCGCGGTAC23630.10234377199384119No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)