FastQCFastQC Report
Sat 6 Aug 2022
EGAF00005113225

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005113225
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2014790
Sequences flagged as poor quality0
Sequence length101
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT31290.15530154507417648No Hit
GTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGCCGCGGTAC21310.10576784677311284No Hit
TTATTACCCTCACTGTCAACCCAACACAGGCATGCTCATAAGGAAAGGTT20770.10308766670471861No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)