FastQCFastQC Report
Tue 26 Jul 2022
EGAF00005113323

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005113323
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2123398
Sequences flagged as poor quality0
Sequence length101
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TTATTACCCTCACTGTCAACCCAACACAGGCATGCTCATAAGGAAAGGTT27460.12932102224830203No Hit
GTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGCCGCGGTAC26640.12545928742515533No Hit
AGCATGTACTGCTCGGAGGTTGGGTTCTGCTCCGAGGTCGCCCCAACCGA26300.1238580803033628No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT24510.11542819575039628No Hit
GTATGAATGGCTCCACGAGGGTTCAGCTGTCTCTTACTTTTAACCAGTGA23330.10987106515123402No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)