FastQCFastQC Report
Tue 28 Jun 2022
EGAF00005114293

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005114293
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences596278620
Sequences flagged as poor quality0
Sequence length15
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGG46944000.7872829651346548No Hit
CAGTCAAAAAAAAAA15467570.2594017206251668No Hit
TGCCTAAAAAAAAAA8006640.13427682515264425No Hit
ATGCCAAAAAAAAAA6770450.1135450739454653No Hit
CGTTGAAAAAAAAAA6692730.11224165642564882No Hit
TCTCGAAAAAAAAAA6597460.11064391341081457No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)