FastQCFastQC Report
Thu 2 May 2024
EGAF00005114494

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005114494
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences55485628
Total Bases5.6 Gbp
Sequences flagged as poor quality0
Sequence length101
%GC50

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCGGAAGAGCACACGTCTGAACTCCAGTCACATTCAGAAATCTCGTATG2844310.5126210340450684TruSeq Adapter, Index 13 (97% over 37bp)

[OK]Adapter Content

Adapter graph