FastQCFastQC Report
Tue 31 May 2022
EGAF00005179398

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005179398
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences91231562
Sequences flagged as poor quality0
Sequence length126
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGCCAATATCTCGTATGC7445500.8161101089116506TruSeq Adapter, Index 6 (100% over 50bp)
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT1308820.14346131660005998No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)