FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005179438

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005179438
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences37957902
Sequences flagged as poor quality0
Sequence length26
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATGCGAT154950.017.9208951
TTGACTT204700.017.621371
TGACAAC174050.017.3278661
AGCTTGA137950.017.0258261
ATCGAGT127400.017.0067311
CCTTACG126900.016.987031
ACTGAAC96650.016.9425431
GACTAAC105250.016.9267521
TTTATGC142350.016.8579441
ACGAGCC121750.016.7607331
TGACGGC114100.016.753551
GGGACCT91600.016.6644461
CACCGAA105300.016.6282068
AGCTACC108850.016.6279148
TGGCTGG135400.016.6076981
CGGACTG87500.016.5421641
GACCTGG133900.016.5397451
TGTTCCG138300.016.5053711
ACTGATG88500.016.4682751
CTCGAAA108750.016.4647661
Produced by FastQC (version 0.11.5)