FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005179450

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005179450
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences64245076
Sequences flagged as poor quality0
Sequence length8
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGACGCCC2110850532.85622231966852No Hit
CTGACTGA1574236024.503605537022015No Hit
ACCGTATG1487504423.153593903445614No Hit
GATTAGAT1161010218.07158263771063No Hit
TGCCGCCC1303430.20288403114349182No Hit
TGACGCCA939460.14623066209774582No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)