Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005179453 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 21447882 |
Total Bases | 171.5 Mbp |
Sequences flagged as poor quality | 0 |
Sequence length | 8 |
%GC | 56 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
CACGGTGC | 7205229 | 33.59412831532736 | No Hit |
GCGATGTG | 5701823 | 26.58455039989496 | No Hit |
TTTCCACT | 4597907 | 21.437580643160942 | No Hit |
AGATACAA | 2879248 | 13.424393140544133 | No Hit |
CCCGGTGC | 134083 | 0.6251572999142759 | No Hit |
TTTCCCCT | 76694 | 0.3575830937525673 | No Hit |
CACGGTGA | 56193 | 0.2619978979742615 | No Hit |
CACGGTTC | 34964 | 0.1630184276470749 | No Hit |
AGCTACAA | 30097 | 0.14032621029899361 | No Hit |
TTTCCACA | 29747 | 0.1386943475351086 | No Hit |
AACGGTGC | 28476 | 0.1327683544696861 | No Hit |
GCGATGTT | 25368 | 0.11827741312638701 | No Hit |
GCGATGTA | 24690 | 0.11511626182948974 | No Hit |
CACGTTGC | 24672 | 0.11503233745877564 | No Hit |
CAAGGTGC | 22334 | 0.10413149419602363 | No Hit |
Adapter Content
Can't analyse adapters as read length is too short (12 vs 0)