FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005179455

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005179455
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences49460984
Sequences flagged as poor quality0
Sequence length26
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGCGAT181850.018.6262251
TGACGGC171450.018.5369951
CAATGGA264700.018.5226758
ACGAGGA193850.018.474021
CCGGTAG232350.018.180431
CTGCGGA175200.018.128811
TGCTACC263500.018.0844441
GGGAATG161850.018.0238131
TGCGGGT162450.018.0126481
GCGGGTG93550.017.999692
GGGAGAT142750.017.9484061
GAAGCGA82200.017.6881226
ATCGAGT185500.017.6828731
TGACTAG170550.017.5676231
GGGATGA126700.017.5620961
TCGCGAG175250.017.5529941
CCACCTA257550.017.5315021
CCGGAAA117250.017.51915410
GCTGCAG187950.017.4842971
CTGAAAC214150.017.3905981
Produced by FastQC (version 0.11.5)