FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005179475

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005179475
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences53908887
Sequences flagged as poor quality0
Sequence length26
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGGACTG177200.017.5545921
ACTGAAC175050.017.4215411
ATCGAGT176300.017.2469431
GCGCGAT147050.017.2347051
GATCGCG184700.017.1884571
GACTGCG223400.017.1802371
GGGAGAT176500.017.1310311
GACTAAC190250.017.0393921
ACTGATG142100.017.0112651
CCGGGAT147150.016.9374161
AGAAACC201550.016.9116428
TGACTAG171950.016.8860861
CACCGAA141200.016.867428
CTGATAG194200.016.8473761
TAACTGA120100.016.8320792
GGATTAC185750.016.8165841
TGGCTGG184550.016.812081
TCCGCGG161300.016.7987338
TGCCCTA242600.016.7608721
TGCGGGT143650.016.6814421
Produced by FastQC (version 0.11.5)