Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005179482 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 26872896 |
Total Bases | 214.9 Mbp |
Sequences flagged as poor quality | 0 |
Sequence length | 8 |
%GC | 54 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
CCTGTGCG | 8995344 | 33.473668040839364 | No Hit |
TACTCTTC | 6837261 | 25.44296305094918 | No Hit |
GGACACGT | 6333160 | 23.567091540859607 | No Hit |
ATGAGAAA | 4363307 | 16.23683208538447 | No Hit |
GGCCACGT | 32351 | 0.12038523871785163 | TruSeq Adapter, Index 20 (100% over 8bp) |
Adapter Content
Can't analyse adapters as read length is too short (12 vs 0)