FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005179492

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005179492
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences59163381
Sequences flagged as poor quality0
Sequence length26
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGACTAG265450.017.7477761
ACTGATG236100.017.6705461
TGACGGC220250.017.6478821
CAATGGA274600.017.3776668
GACTAAC186550.017.2167321
GGGACCT172250.016.996881
TACGGAT191500.016.891841
TGGCCAG243700.016.8773121
GCGCGAT123150.016.6991521
TAGTTGG196450.016.6749691
CTGCGGA184550.016.6716271
GGCGACT144550.016.6142161
ACGAGCC231250.016.5618691
CTAATGG184400.016.5441591
CTAAGAC173400.016.5207441
TGAGCAT184950.016.5165921
GGGCATC193150.016.4989681
TGCCAAA205100.016.4301321
TACGGGC189600.016.4174981
CGACCTT178300.016.414541
Produced by FastQC (version 0.11.5)