FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005179500

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005179500
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences61529959
Sequences flagged as poor quality0
Sequence length26
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACTGATG243800.017.923431
TGACTAG269500.017.73211
CAATGGA280950.017.4746768
TGACGGC224700.017.3504811
GGGACCT168600.017.1321721
GACTAAC193850.017.1191961
ACGAGCC245250.016.8305471
TGGCCAG258900.016.793081
TACGGAT193600.016.743511
TAGTTGG199450.016.6886841
CTGCGGA200150.016.6652971
GCGCGAT128750.016.639681
GGGCATC201800.016.638071
TGAGCAT186700.016.5855311
CTAATGG203700.016.5565281
CTAAGAC180950.016.5543081
TCGGTAA276300.016.5246661
CGACCTT184700.016.4835431
TGACAAC216850.016.4196281
CGCTTCA182550.016.3434661
Produced by FastQC (version 0.11.5)