FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005179542

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005179542
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences37310936
Sequences flagged as poor quality0
Sequence length26
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATTGAG178650.018.2677483
GGTATTG241300.018.229961
AGGCGAC145950.018.0668358
GGCGACA147000.017.9921579
GGGCATC199650.017.9750821
CCCTCCT254300.017.9627341
ACTGTCC247900.017.9624861
CGACTTC226300.017.9178941
GTATTGA178250.017.8038442
TGAGGTC225150.017.7999323
TGCTACC191700.017.7918071
CACGAGT147750.017.7423213
TTTGCGA118700.017.6862182
TTGGCAA217600.017.6460321
GCCGAAG114850.017.6345733
CGTAAAG176600.017.4547183
TCGAATG165900.017.401098
TGCGCAG251900.017.3675441
CCGGGAT113300.017.3203581
CGCTGGA142300.017.3120041
Produced by FastQC (version 0.11.5)