FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005179544

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005179544
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences36493311
Sequences flagged as poor quality0
Sequence length26
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATTGAG175550.018.2405033
GGTATTG238350.018.0371861
GGGCATC187900.017.961221
TGCTACC185200.017.953021
GTATTGA174500.017.9432722
GGCGACA141850.017.9199099
AGGCGAC141700.017.917788
CCCTCCT262700.017.8464721
TGAGGTC214550.017.6748663
ACTGTCC240800.017.6293531
TTTGCGA117300.017.6135252
CGACTTC219300.017.6062221
CACGAGT147100.017.580543
TCGAATG158850.017.5696858
TTGGCAA216600.017.5486071
CGTAAAG167750.017.443283
ATGCGAC112250.017.42485210
GATGCGA112550.017.4229499
GATCGTA175400.017.3992331
TGACTAG125550.017.3284631
Produced by FastQC (version 0.11.5)