FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005179566

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005179566
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences32528276
Sequences flagged as poor quality0
Sequence length26
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGGCATC174250.017.8793531
GAATGAA137850.017.7321321
AGCTTGA169000.017.7305261
GGGACCT111250.017.6206761
GGTATTG164000.017.4782871
GCGCGAT90800.017.4476051
ATCGAGT122300.017.443391
GACCATC138250.017.434673
GGCGACT97300.017.392181
ATGCGAT100950.017.3082471
CCGAATT147100.017.30693210
GTCGACT94200.017.1645938
TGCTACC133350.017.1379811
CTGCCTA131000.017.1171261
AGCGCCT130350.017.0300668
ATAGACC85750.016.9005471
TACGGAT113000.016.896391
CAACTAG136000.016.884941
GACCAAT154050.016.8802221
CCGGGAT90600.016.8568861
Produced by FastQC (version 0.11.5)