FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005179573

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005179573
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences33811650
Sequences flagged as poor quality0
Sequence length8
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACTGTGGC979604328.972389694084733No Hit
TACCACCA839396324.825653288141808No Hit
GGGTCAAG789047823.336565946944322No Hit
CTAAGTTT688495620.3626738121328No Hit
TCCCACCA1343380.397312760542594No Hit
TACCCCCA1157230.3422577720992616No Hit
ACGGTGGC556190.16449655666020438No Hit
GGGTCCAG356530.10544590400054418No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)