FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005179575

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005179575
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences33875557
Sequences flagged as poor quality0
Sequence length8
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACTGTGGC979162728.904696681444975No Hit
TACCACCA844230924.921535607517832No Hit
GGGTCAAG792936823.407343530912275No Hit
CTAAGTTT689031320.340072932232527No Hit
TACCCCCA1268240.37438203599131964No Hit
TCCCACCA1155290.3410394108058504No Hit
ACGGTGGC457900.13517120914056116No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)