FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005179593

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005179593
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences54631149
Sequences flagged as poor quality0
Sequence length8
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGTCTATG1529567027.998074871169194No Hit
CAATACCC1503952927.529219639879805No Hit
ACCACGAA1498480927.429057001894652No Hit
GTGGGTGT869222615.910750842893675No Hit
CAATACCA663730.121492959996137No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)