FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005179600

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005179600
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences61529959
Sequences flagged as poor quality0
Sequence length8
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCGAAAG2184963235.5105583606841No Hit
TTTCTGTC2006750632.614203432184965No Hit
GAAACCCT1851751930.09512650577258No Hit
CCGTGTGA3720810.6047151762282176No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)