Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005179601 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 29116950 |
Total Bases | 232.9 Mbp |
Sequences flagged as poor quality | 0 |
Sequence length | 8 |
%GC | 51 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
AGAGTCGC | 10604689 | 36.42101593745224 | No Hit |
TATCGATA | 6971958 | 23.944671402739644 | No Hit |
GTGTCGCT | 5910963 | 20.300762957658684 | No Hit |
CCCAATAG | 4525090 | 15.541085175473393 | No Hit |
AGCGTCGC | 97727 | 0.3356361157332756 | No Hit |
AGAGTCGA | 60318 | 0.20715768650219202 | No Hit |
AGAGTCTC | 54690 | 0.18782873893041682 | No Hit |
AGAGTAGC | 47635 | 0.16359886595264958 | No Hit |
TATCGAAA | 36808 | 0.12641433941398397 | No Hit |
TATCTATA | 36269 | 0.12456318398733383 | No Hit |
CCAAATAG | 31406 | 0.10786157203965388 | No Hit |
CCCAATAT | 31236 | 0.10727771967874382 | No Hit |
GTGTCGCG | 30241 | 0.10386046615459381 | No Hit |
Adapter Content
Can't analyse adapters as read length is too short (12 vs 0)