FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005179630

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005179630
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences74197250
Sequences flagged as poor quality0
Sequence length8
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCAGTTCT1974802026.615568636303905No Hit
CTTTGCGG1886567525.426380357762586No Hit
TGCACAAA1754743323.64970804174009No Hit
AAGCAGTC1703169822.95462163355111No Hit
CTTTGCGA900920.12142228990966646No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)