FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005179649

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005179649
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences94350230
Sequences flagged as poor quality0
Sequence length8
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GAGCACCG2496498326.459906880990115No Hit
ATAGTTAC2356889024.980214674622413No Hit
TGCTGAGT2318822124.576750899282388No Hit
CCTACGTA2144362322.727684924562453No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)