FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005179662

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005179662
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences55576119
Sequences flagged as poor quality0
Sequence length26
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GACTAAC312900.018.273521
ACTGAAC241750.018.148371
TTGAACG232750.018.098021
TGCGTGG224600.017.9530641
GACGCGT213400.017.9343681
CTGCGGA165850.017.92541
GAAATGA278500.017.8978631
TTGCGCG175950.017.7148742
CTAAGAC180050.017.645051
GGTATTG324200.017.6365951
TGAGCCG202050.017.6100481
CATGGAG172600.017.5778333
CGTCGCG127500.017.5759627
TCTGGAA233350.017.5627981
TGACTAG190550.017.5284291
CCCTCCT304750.017.5214631
ATAACGC192400.017.5158621
ACGGAGA193550.017.5151521
AGCGAAC136950.017.4942519
GATCGCG178550.017.4795511
Produced by FastQC (version 0.11.5)