FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005179664

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005179664
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences54911372
Sequences flagged as poor quality0
Sequence length26
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GACTAAC307700.018.3625931
TTGAACG227750.018.1859841
ACTGAAC234600.018.1069031
GAAATGA268000.018.0485151
CTGCGGA165550.018.0466251
GACGCGT210750.017.949151
TGCGTGG212500.017.8860571
TTGCGCG171550.017.8779982
CTAAGAC182300.017.8753411
TGAGCCG205150.017.6346531
GCCGGAG102900.017.5896433
CGACGGA140300.017.5758279
CGGAGCT173400.017.5584221
TGACTAG184150.017.5219551
CCCTCCT305000.017.5118241
CATGGCG167950.017.502881
TGCTACC219100.017.4842221
ATAACGC187050.017.4748841
ACGGAGA191350.017.4480861
AAACCTG193800.017.433951
Produced by FastQC (version 0.11.5)