FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005179666

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005179666
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences57137418
Sequences flagged as poor quality0
Sequence length26
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GACTAAC317800.018.4187181
ACTGAAC254350.018.172441
CTGCGGA164100.018.1276441
TTGAACG247950.018.008151
GAAATGA282350.017.9786591
CTAAGAC185750.017.7810441
GACGCGT217100.017.7336081
TGACTAG196800.017.7331091
ATAACGC205250.017.719431
TGAGCCG211100.017.6358811
TGCGTGG219350.017.6337851
TTGCGCG173550.017.5903932
TCTGGAA244650.017.5887181
CGGAGCT178350.017.5822091
AGCGAAC137800.017.5607439
CATGGAG177850.017.5529653
GATCGCG186050.017.526571
AAACCTG212600.017.4879261
TCTATTG415450.017.4577451
ACGGAGA198700.017.4477621
Produced by FastQC (version 0.11.5)