FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005179670

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005179670
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences42361514
Sequences flagged as poor quality0
Sequence length26
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTGGGAG308600.019.2838922
CGAGAAG369500.019.178111
AGAAGAG288050.019.1078013
AGGGTGA380500.019.0862541
AGTGTCA469750.018.9215351
TCGAGGC298350.018.8779891
GGAGCGA128850.018.8668169
AATAGGG275350.018.81617210
GGCGACT201350.018.754241
CTCACAC475450.018.7388631
AGAGTGA252500.018.716756
GAGAAGA294150.018.708172
ATGAATG290350.018.65346710
CAATGAA246550.018.6371788
GCGCAAC257200.018.6089081
CCAAGGG217050.018.6084695
GAGCGAG130700.018.59231210
ACAAACA302600.018.5620277
GTGCATA405250.018.5251851
AGATGGT296300.018.4812763
Produced by FastQC (version 0.11.5)