Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005179685 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 38138262 |
Sequences flagged as poor quality | 0 |
Sequence length | 26 |
%GC | 49 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
ATGCGAT | 15710 | 0.0 | 17.96858 | 1 |
TTGACTT | 20415 | 0.0 | 17.624792 | 1 |
TGACAAC | 16375 | 0.0 | 17.135015 | 1 |
GACTAAC | 10345 | 0.0 | 17.085945 | 1 |
ATCGAGT | 12435 | 0.0 | 16.925165 | 1 |
TGTTCCG | 14295 | 0.0 | 16.920183 | 1 |
TGGCTGG | 13845 | 0.0 | 16.841558 | 1 |
CCTTACG | 13075 | 0.0 | 16.823505 | 1 |
GGGACCT | 9110 | 0.0 | 16.810854 | 1 |
TGACGGC | 11600 | 0.0 | 16.789621 | 1 |
TTTATGC | 14045 | 0.0 | 16.779789 | 1 |
CACCGAA | 11360 | 0.0 | 16.71612 | 8 |
AGCTTGA | 14450 | 0.0 | 16.704073 | 1 |
AGCTACC | 10570 | 0.0 | 16.678854 | 8 |
GACCTGG | 13550 | 0.0 | 16.647161 | 1 |
ACGAGCC | 12650 | 0.0 | 16.629597 | 1 |
CTCGAAA | 10835 | 0.0 | 16.608683 | 1 |
CTGATAG | 10655 | 0.0 | 16.59823 | 1 |
ACTGAAC | 9185 | 0.0 | 16.58646 | 1 |
TCCCGAT | 10565 | 0.0 | 16.578667 | 1 |