FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005179693

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005179693
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences96777099
Sequences flagged as poor quality0
Sequence length8
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GAGCACCG2564530126.499348776718346No Hit
ATAGTTAC2418764224.993146364100046No Hit
TGCTGAGT2378322524.575261343595347No Hit
CCTACGTA2204910122.7833870077052No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)