FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005179729

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005179729
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences20922082
Sequences flagged as poor quality0
Sequence length8
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCCTAAC597202028.544099960988582No Hit
CGGTCCCA518243724.77017822604844No Hit
ACAGAGGT504258424.101731366887865No Hit
TATAGTTG427040520.410994469862036No Hit
CGGTCCCC540300.25824389752415655No Hit
GTCCTACC293520.14029196520690435No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)