FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005179738

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005179738
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences28785742
Sequences flagged as poor quality0
Sequence length26
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGGCATC159550.017.7101631
GAATGAA124950.017.6591641
GGGACCT95050.017.594831
GGCGACT90700.017.5564481
GGTATTG144400.017.4417251
AGCTTGA152000.017.4382611
GCGCGAT79950.017.4274391
TGCTACC113600.017.4072131
GACCATC115850.017.3245093
CCGGGAT82950.017.2312491
ATCGAGT103300.017.2063221
GTCGACT80100.017.1907068
CCGAATT128700.017.18692210
ATGCGAT85350.017.1803251
CACCGAA79950.017.0228378
AGAAACC102200.016.8587998
CACCGAC68000.016.85261210
AGCGCCT109000.016.8070418
CAACTAG117250.016.7800181
ATGTCCG111300.016.7390026
Produced by FastQC (version 0.11.5)