FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005179748

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005179748
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15388694
Sequences flagged as poor quality0
Sequence length150
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTAGATC22500.06.015176140-144
GATCGGA256750.05.9498763140-144
TAGATCG71850.05.9115076140-144
ACACGTC162200.05.77874140-144
CACGTCT159550.05.6852136140-144
CACACGT175450.05.604932140-144
AGATCGG288500.05.6045012140-144
GGGGGGG26457.0447913E-65.45006562
Produced by FastQC (version 0.11.5)