FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005179749

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005179749
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15388694
Sequences flagged as poor quality0
Sequence length150
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA255900.05.6210356140-144
TAGATCG71500.05.3768306140-144
AGATCGG286000.05.336555140-144
GCGTCGT186150.05.1669536140-144
GTCGTGT178550.05.128831140-144
Produced by FastQC (version 0.11.5)