Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005179771 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 12986187 |
Sequences flagged as poor quality | 0 |
Sequence length | 150 |
%GC | 51 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GTGAGTG | 4940 | 0.0 | 25.214575 | 1 |
TGAGTGA | 6140 | 0.0 | 20.521173 | 2 |
GAGTGAT | 6540 | 0.0 | 19.486238 | 3 |
AGTGATG | 9565 | 0.0 | 13.624673 | 4 |
ATGGTTG | 11030 | 0.0 | 11.945602 | 8 |
GATGGTT | 12915 | 0.0 | 10.592335 | 7 |
TGGTTGA | 12375 | 0.0 | 10.589091 | 9 |
GTGATGG | 17310 | 0.0 | 8.693241 | 5 |
TAGTGTG | 3380 | 0.0 | 8.265089 | 15-19 |
TGATGGT | 20255 | 0.0 | 7.1449027 | 6 |
GTAGTGT | 4065 | 0.0 | 6.9431734 | 15-19 |
GATCGGA | 11035 | 0.0 | 5.415496 | 1 |