FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005179774

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005179774
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14426696
Sequences flagged as poor quality0
Sequence length150
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGTCTAG8250.026.1787539
AGTCTAG5304.3995533E-714.9416479
CTAGTCC6850.09.24854610-14
GTCTAGT9152.382876E-107.86790378
TCTAGTC9550.06.7845469
CTAGATC9150.06.29665830-34
Produced by FastQC (version 0.11.5)