FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005179776

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005179776
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19108490
Sequences flagged as poor quality0
Sequence length150
%GC56

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCTAG6100.0047049539.4537573
CTAGCCG11552.8096928E-47.47358476
AGTGAGT33000.07.29353861
GTGAGTA36456.1118044E-105.73542072
Produced by FastQC (version 0.11.5)