FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005179779

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005179779
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14321701
Sequences flagged as poor quality0
Sequence length150
%GC56

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGAGTGA44750.024.4598922
GAGTGAT52600.021.353923
GTGAGTG55100.020.6754421
AGTGATG71850.015.5333444
ATGGTTG72800.015.5253118
GATGGTT82200.013.1368587
TGGTTGA96200.012.6468889
TAGTGTG22600.010.44801615-19
TGATGGT148950.08.3129266
GTAGTGT30600.07.669456515-19
GTGATGG169900.07.2880055
GGTAGTG49850.05.429890615-19
AGTGTGG48500.05.10605115-19
Produced by FastQC (version 0.11.5)