FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005179879

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005179879
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16300468
Sequences flagged as poor quality0
Sequence length150
%GC56

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCACTCA35350.012.8313599
AGCCACT77850.06.2888587
AAGCCAC79200.06.2725116
GCCACTC82000.05.97058068
GGCCTAA21750.05.097536675-79
TACAAAG109200.05.08332872
Produced by FastQC (version 0.11.5)