FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005179888

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005179888
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14156562
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGAGCAC208500.08.9094058
GAGCACA210450.08.7926399
GATCGGA225250.08.4385541
TCGGAAG244950.07.70113
ATCGGAA277800.06.9200292
AAGAGCA308150.06.21508177
CGGAAGA344800.05.84679944
GGAAGAG356650.05.6525345
GAAGAGC371900.05.4788286
CTAGATC17400.05.21389140-144
GCCTAGG12950.05.115257785-89
CCTAGGA11850.05.10399785-89
TAGATCG67850.05.008789140-144
Produced by FastQC (version 0.11.5)