FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005179918

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005179918
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16225463
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACACTA24150.015.2029487
ACACACT47500.08.3357346
CACTATA60200.06.81639059
AACACAC65750.06.569595
ACACTAT64550.06.46858368
CAACACA72050.05.59547334
CTAGCTA15550.05.46333725-29
Produced by FastQC (version 0.11.5)