FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005179920

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005179920
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12035966
Sequences flagged as poor quality0
Sequence length150
%GC55

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGACTAA9650.0030252097.46188933
TAGGCTA15802.1231487E-46.38097052
TACGTAA18352.2744702E-45.886153
GTACGTA19400.00290198955.19687272
Produced by FastQC (version 0.11.5)