FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005179926

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005179926
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15611957
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCACTAG11450.06.6653857105-109
CACTAGT11300.05.989276105-109
CTAGTGC11150.05.8113236100-104
GACTAGT12600.05.599608115-119
TGACTAG13050.05.406518115-119
ACTAGTG12800.05.3996882100-104
CTAGTTG14200.05.2735734110-114
ACTAGTA14300.05.0346127115-119
Produced by FastQC (version 0.11.5)