FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005179946

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005179946
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15541088
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACACTA20650.011.5059187
CCCTAAG20851.3273166E-87.2517137
CACTATA46650.06.01922139
ACACACT41201.8189894E-125.9416776
CTAAGAG25656.7213114E-75.89466769
CCCCTAA26351.108212E-65.7380736
CTAGCTA8903.6379788E-125.662508525-29
ACACTAT47059.640644E-115.2029148
Produced by FastQC (version 0.11.5)