FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005179948

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005179948
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15321855
Sequences flagged as poor quality0
Sequence length150
%GC57

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACACTA17453.6379788E-129.4901388
ACGTTAA26951.2369128E-106.94586564
TACGTTA28506.366463E-116.8253833
TACCGAG76250.06.70851853
CGAGATA79600.06.1508626
GAGATAA78600.06.04590857
CTAGACC8155.4569682E-115.6542315120-124
ATCCTAG9157.2759576E-125.5079165115-119
CGTTAAA39659.076757E-105.4472665
ACACTAC34008.1741746E-75.08244289
Produced by FastQC (version 0.11.5)