FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005179956

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005179956
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16515261
Sequences flagged as poor quality0
Sequence length150
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGAGTAG32350.08.6793753
GTTAATC58850.08.5741121
GTGAGTA34750.08.0799362
TAGCATG30200.07.86706978
AGTGAGT36250.07.75522041
GAGTAGG46600.06.7976634
TTAATCA87600.06.1638962
CTAGGAG10500.05.348345850-54
TAGGAGG54551.8189894E-125.14725737
AGTAGGA64150.05.05020145
Produced by FastQC (version 0.11.5)