FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005179962

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005179962
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15673542
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCTAA12150.018.9642373
TAGGCTA33601.8189894E-126.6437062
AGATCTA36601.8189894E-116.099142
ACTCTAA34706.89397E-95.60268163
GCTCTAA36102.9740477E-95.5848633
CGACTAA18350.001444225.4935573
CGTCTAA22359.796171E-55.4768783
TAGAGTA44355.493348E-105.19570352
TTAGGCT42403.6507117E-95.1584621
ATACTAA49055.820766E-115.13795953
Produced by FastQC (version 0.11.5)