FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005179972

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005179972
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14004175
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGAGTAG35450.017.6682783
GAGTAGG42550.015.227644
TAGGAGG44300.014.9516547
AGTGAGT41050.014.7511261
GTGAGTA44950.013.2935082
GTCTCTT70350.09.837081
AGTAGGA78550.08.8902755
GGAGGGG83000.08.4139279
GTAGGAG78950.08.2984016
AGGAGGG85750.07.80825478
CTAGGAG19300.06.56548850-54
TTCTAGG23100.06.23346750-54
Produced by FastQC (version 0.11.5)