FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005179975

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005179975
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15815831
Sequences flagged as poor quality0
Sequence length150
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGACTAA16408.066654E-77.46587563
GACTCTA24355.113179E-96.80588442
TACGTAA25059.280484E-96.61295843
CGTCTAA22653.0482752E-66.0417273
ACTCTAA23901.1872071E-66.0270923
GTACGTA28851.650169E-75.7443082
TAGGCTA20251.3954991E-45.6931242
Produced by FastQC (version 0.11.5)